Arrow on GPS pointed forward. With some that means cable comes out in front of GPS.
Aux mag orientation set to 0,0,0
Type set to "aux only"
Mag calibration always calibrates both aux and onboard, no matter what your settings are, so don't worry there.
Once you start mag cal, it is always gathering data, so you can't set it down on ground or your car between orientations.
Attitude -> Settings -> AttitudeEstimationAlgorithm needs to be INS13 (outdoor/navigation) for GPS flight modes.